Publications

PUBLICATION

In Vivo Imaging of Muscle-tendon Morphogenesis in Drosophila Pupae.

Lemke SB, Schnorrer F.
J Vis Exp. 2018 Feb 6;(132). doi: 10.3791/57312. PMID: 29443094

Muscle Dynamics

PUBLICATION

The elmo-mbc complex and rhogap19d couple Rho family GTPases during mesenchymal-to-epithelial-like transitions.

Toret CP, Shivakumar PC, Lenne PF, Le Bivic A.
Development. 2018 Feb 2. pii: dev.157495. doi: 10.1242/dev.157495. PMID: 29437779

Cell polarity and morphogenesis of epithelia

PUBLICATION

SLALOM, a flexible method for the identification and statistical analysis of overlapping continuous sequence elements in sequence- and time-series data

Prytuliak R, Pfeiffer F, Habermann BH.
BMC Bioinformatics. 2018 Jan 26;19(1):24. doi: 10.1186/s12859-018-2020-x. PMID: 29373955

Computational Biology

PUBLICATION

A Bioresistant Nitroxide Spin Label for In-Cell EPR Spectroscopy: In Vitro and In Oocytes Protein Structural Dynamics Studies.

Karthikeyan G, Bonucci A, Casano G, Gerbaud G, Abel S, Thomé V, Kodjabachian L, Magalon A, Guigliarelli B, Belle V, Ouari O, Mileo E.
Angew Chem Int Ed Engl. 2018 Jan 26;57(5):1366-1370. doi: 10.1002/anie.201710184. PMID: 29227566

Biology of ciliated epithelia

PUBLICATION

Two distinct mechanisms silence chinmo in Drosophila neuroblasts and neuroepithelial cells to limit their self-renewal

Dillard C, Narbonne-Reveau K, Foppolo S, Lanet E, Maurange C.
Development. 2018 Jan 25;145(2). pii: dev154534. doi: 10.1242/dev.154534. PMID: 29361557

Neural stem cell plasticity

PUBLICATION

The axolotl genome and the evolution of key tissue formation regulators.

Nowoshilow S, Schloissnig S, Fei JF, Dahl A, Pang AWC, Pippel M, Winkler S, Hastie AR, Young G, Roscito JG, Falcon F, Knapp D, Powell S, Cruz A, Cao H, Habermann B, Hiller M, Tanaka EM, Myers EW.
Nature. 2018 Jan 24. doi: 10.1038/nature25458. PMID: 29364872

Computational Biology

PUBLICATION

High-resolution TADs reveal DNA sequences underlying genome organization in flies.

Ramírez F, Bhardwaj V, Arrigoni L, Lam KC, Grüning BA, Villaveces J, Habermann B, Akhtar A, Manke T.
Nat Commun. 2018 Jan 15;9(1):189. doi: 10.1038/s41467-017-02525-w. PMID: 29335486

Computational Biology

PUBLICATION

The complete and fully assembled genome sequence of Aeromonas salmonicida subsp. pectinolytica and its comparative analysis with other Aeromonas species: investigation of the mobilome in environmental and pathogenic strains.

Pfeiffer F, Zamora-Lagos MA, Blettinger M, Yeroslaviz A, Dahl A, Gruber S, Habermann BH.
BMC Genomics. 2018 Jan 5;19(1):20. doi: 10.1186/s12864-017-4301-6. PMID: 29304740

Computational Biology

PUBLICATION

Crumbs, Moesin and Yurt regulate junctional stability and dynamics for a proper morphogenesis of the Drosophila pupal wing epithelium.

Salis P, Payre F, Valenti P, Bazellieres E, Le Bivic A, Mottola G.
Sci Rep. 2017 Dec 1;7(1):16778. doi: 10.1038/s41598-017-15272-1. PMID: 29196707

Cell polarity and morphogenesis of epithelia

PUBLICATION

Animal multicellularity and polarity without Wnt signaling.

Schenkelaars Q, Pratlong M, Kodjabachian L, Fierro-Constain L, Vacelet J, Le Bivic A, Renard E, Borchiellini C.
Sci Rep. 2017 Nov 13;7(1):15383. doi: 10.1038/s41598-017-15557-5. PMID: 29133828

Biology of ciliated epithelia

PUBLICATION

Animal multicellularity and polarity without Wnt signaling.

Schenkelaars Q, Pratlong M, Kodjabachian L, Fierro-Constain L, Vacelet J, Le Bivic A, Renard E, Borchiellini C.
Sci Rep. 2017 Nov 13;7(1):15383. doi: 10.1038/s41598-017-15557-5. PMID: 29133828

Cell polarity and morphogenesis of epithelia

PUBLICATION

Role of the crumbs proteins in ciliogenesis, cell migration and actin organization.

Bazellières E, Aksenova V, Barthélémy-Requin M, Massey-Harroche D, Le Bivic A.
Semin Cell Dev Biol. 2017 Oct 24. pii: S1084-9521(16)30333-0. doi: 10.1016/j.semcdb.2017.10.018. PMID: 29056580

Cell polarity and morphogenesis of epithelia

PUBLICATION

Viscoelastic Dissipation Stabilizes Cell Shape Changes during Tissue Morphogenesis

Raphaël Clément, Benoît Dehapiot, Claudio Collinet, Thomas Lecuit, Pierre-François Lenne
Current Biology

Tissue Architecture and Plasticity Physical approaches to cell dynamics and tissue morphogenesis

PUBLICATION

The Hox proteins Ubx and AbdA collaborate with the transcription pausing factor M1BP to regulate gene transcription.

Zouaz A, Auradkar A, Delfini MC, Macchi M, Barthez M, Ela Akoa S, Bastianelli L, Xie G, Deng WM, Levine SS, Graba Y, Saurin AJ.
EMBO J. 2017 Oct 2;36(19):2887-2906. doi: 10.15252/embj.201695751. PMID: 28871058

Mechanisms of gene regulation by transcription factors

PUBLICATION

Gene Tagging Strategies To Assess Protein Expression, Localization, and Function in Drosophila.

Kanca O, Bellen HJ, Schnorrer F.
Genetics. 2017 Oct;207(2):389-412. doi: 10.1534/genetics.117.199968. PMID: 28978772

Muscle Dynamics

PUBLICATION

Zic-proteins are repressors of dopaminergic forebrain fate in mice and C. elegans.

Tiveron MC, Beclin C, Murgan S, Wild S, Angelova A, Marc J, Coré N, de Chevigny A, Herrera E, Bosio A, Bertrand V, Harold C.
J Neurosci. 2017 Sep 29. pii: 3888-16. PMID: 28972122

Polarization and binary cell fate decisions in the nervous system Molecular control of neurogenesis

PUBLICATION

Oligopeptide Transporters of the SLC15 Family Are Dispensable for Peptidoglycan Sensing and Transport in Drosophila.

Capo F, Chaduli D, Viallat-Lieutaud A, Charroux B, Royet J.
J Innate Immun. 2017;9(5):483-492. doi: 10.1159/000475771. PMID: 28715804

Host pathogen interaction in the Drosophila model

PUBLICATION

Binding of ZO-1 to α5β1 integrins regulates the mechanical properties of α5β1-fibronectin links.

González-Tarragó V, Elosegui-Artola A, Bazellières E, Oria R, Pérez-González C, Roca-Cusachs P.
Mol Biol Cell. 2017 Jul 7;28(14):1847-1852. doi: 10.1091/mbc.E17-01-0006. PMID: 28251923

Cell polarity and morphogenesis of epithelia

PUBLICATION

Nodal–Activin pathway is a conserved neural induction signal in chordates

Yann Le Petillon, Guillaume Luxardi, Pierluigi Scerbo, Marie Cibois, Anthony Leon, Lucie Subirana, Manuel Irimia, Laurent Kodjabachian, Hector Escriva and Stephanie Bertrand
Nature Ecology & Evolution

Biology of ciliated epithelia

PUBLICATION

Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2.

Scerbo P, Marchal L, Kodjabachian L.
Elife. 2017 Jun 27;6. pii: e21526. PMID: 28654420

Biology of ciliated epithelia